Package | Description |
---|---|
g2d.graph |
This package contains the specialized graph members of the glyphish hierarchy.
|
g2d.pla |
This package contains the Pathway Logic Assistant.
|
Modifier and Type | Field and Description |
---|---|
IOPSubgraph |
Seed.subgraph |
Modifier and Type | Field and Description |
---|---|
java.util.HashMap<java.lang.Integer,IOPSubgraph> |
Seed.modifiedSubgraphs |
java.util.HashMap<java.lang.Integer,IOPSubgraph> |
Seed.subgraphs |
Modifier and Type | Method and Description |
---|---|
IOPSubgraph |
IOPGraph.getParentSubgraph(IOPSubgraph subgraph) |
IOPSubgraph |
IOPGraph.getSmallestSubgraph(IOPSubgraph s,
java.awt.geom.Point2D p) |
IOPSubgraph |
IOPGraph.getSubgraph(java.awt.geom.Point2D p) |
IOPSubgraph |
IOPGraph.getSubgraph(java.lang.String id) |
IOPSubgraph[] |
IOPGraph.getSubgraphsInArray() |
IOPSubgraph |
IOPGraph.makeSubgraph(java.util.Collection<GraphItem> items) |
IOPSubgraph |
IOPGraph.makeSubgraph(java.util.Collection<IOPNode> nodes,
java.util.Collection<IOPEdge> edges,
java.util.Collection<IOPSubgraph> subgraphs) |
IOPSubgraph |
IOPGraph.makeSubgraph(IOPNode[] nodes,
IOPEdge[] edges,
IOPSubgraph[] subgraphs) |
IOPSubgraph |
IOPGraph.makeSubgraph(java.lang.String name,
java.util.Collection<IOPNode> nodes,
java.util.Collection<IOPEdge> edges,
java.util.Collection<IOPSubgraph> subgraphs) |
IOPSubgraph |
IOPGraph.makeSubgraph(java.lang.String name,
IOPNode[] nodes,
IOPEdge[] edges,
IOPSubgraph[] subgraphs) |
static IOPSubgraph |
DotParserUtils.parseSubgraphAttributes(IOPSubgraph subgraph,
java.lang.String subgraph_id,
java.util.HashMap<java.lang.String,java.lang.String> attributes,
double graphHeight) |
Modifier and Type | Method and Description |
---|---|
java.util.Collection<IOPSubgraph> |
IOPGraph.getSubgraphInCollection() |
Modifier and Type | Method and Description |
---|---|
void |
IOPSubgraph.addSubgraph(IOPSubgraph s) |
void |
IOPGraph.addSubgraph(IOPSubgraph s)
Adds a subgraph to the graph.
|
IOPGraph |
IOPGraph.collapse(IOPSubgraph subgraph,
IOPNode replacement)
collapses the given subgraph to a single new given node.
|
void |
IOPGraph.contract(IOPSubgraph subgraph,
IOPNode replacement)
contracts the given subgraph to a single new given node.
|
boolean |
IOPGraph.delete(IOPSubgraph subgraph)
Removes the given subgraph from the graph.
|
IOPSubgraph |
IOPGraph.getParentSubgraph(IOPSubgraph subgraph) |
IOPSubgraph |
IOPGraph.getSmallestSubgraph(IOPSubgraph s,
java.awt.geom.Point2D p) |
IOPSubgraph |
IOPGraph.makeSubgraph(IOPNode[] nodes,
IOPEdge[] edges,
IOPSubgraph[] subgraphs) |
IOPSubgraph |
IOPGraph.makeSubgraph(java.lang.String name,
IOPNode[] nodes,
IOPEdge[] edges,
IOPSubgraph[] subgraphs) |
static IOPSubgraph |
DotParserUtils.parseSubgraphAttributes(IOPSubgraph subgraph,
java.lang.String subgraph_id,
java.util.HashMap<java.lang.String,java.lang.String> attributes,
double graphHeight) |
void |
IOPGraph.removeSubgraph(IOPSubgraph subgraph)
Removes the subgraph from the graph.
|
Modifier and Type | Method and Description |
---|---|
static java.lang.String |
Dot.makeDotInput(IOPGraph graph,
java.util.Collection<IOPSubgraph> subgraphs,
java.util.Collection<IOPNode> nodes,
java.util.Map<java.lang.Integer,IOPEdge> edgeMap)
Computes the dot description of a
IOPGraph instance from
its nodes and edges. |
IOPSubgraph |
IOPGraph.makeSubgraph(java.util.Collection<IOPNode> nodes,
java.util.Collection<IOPEdge> edges,
java.util.Collection<IOPSubgraph> subgraphs) |
IOPSubgraph |
IOPGraph.makeSubgraph(java.lang.String name,
java.util.Collection<IOPNode> nodes,
java.util.Collection<IOPEdge> edges,
java.util.Collection<IOPSubgraph> subgraphs) |
protected void |
Seed.setModifiedSubgraphs(java.util.HashMap<java.lang.Integer,IOPSubgraph> modifiedSubgraphs) |
Constructor and Description |
---|
IOPSubgraph(IOPSubgraph clone) |
Seed(IOPGraph graph,
IOPSubgraph subgraph,
IOPNode node,
java.util.HashSet<java.lang.Integer> nodes,
java.util.HashSet<java.lang.Integer> edges,
java.util.HashSet<java.lang.Integer> subgraphs) |
Modifier and Type | Method and Description |
---|---|
void |
SubgraphTabita.addSubgraph(IOPSubgraph subgraph) |
void |
SubgraphTabita.collapseSubgraph(IOPSubgraph subgraph,
IOPNode.NodeType nodetype,
java.lang.String name) |
void |
SubgraphTabita.deleteSubgraph(IOPSubgraph subgraph) |